STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysESerine acetyltransferase. (195 aa)    
Predicted Functional Partners:
cysK_2
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.999
mccA_2
O-acetylserine dependent cystathionine beta-synthase.
 
 0.998
cysK1
O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.998
cysK_1
Cysteine synthase.
 
 0.997
mccA_1
O-acetylserine dependent cystathionine beta-synthase.
 
 0.982
cysS_1
cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.957
cysS_2
cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.936
pspA_2
Phosphoserine phosphatase 1; Belongs to the phosphoglycerate mutase family.
     
  0.917
sdhB
L-serine dehydratase, beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.913
sdhA
L-serine dehydratase, alpha chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.913
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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