STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97576.1DNA-binding transcriptional repressor AcrR. (205 aa)    
Predicted Functional Partners:
AQR97575.1
Phosphorylated carbohydrates phosphatase.
       0.631
emrA_2
Multidrug export protein EmrA.
 
   
 0.511
AQR97577.1
Putative ABC transporter ATP-binding protein.
       0.509
AQR97578.1
Putative ABC transporter ATP-binding protein.
       0.509
kynB
Kynurenine formamidase.
  
     0.471
AQR97213.1
Hypothetical protein.
  
     0.469
AQR94771.1
Hypothetical protein.
  
     0.439
AQR97471.1
Hypothetical protein.
  
     0.427
AQR94765.1
Hypothetical protein.
  
  
 0.422
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.418
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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