Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
emrA_2Multidrug export protein EmrA. (220 aa)    
Predicted Functional Partners:
mdtN_4
Multidrug resistance protein MdtN; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     0.849
macB_3
Macrolide export ATP-binding/permease protein MacB.
  
 
 0.821
emrB_2
Multidrug export protein EmrB; Belongs to the major facilitator superfamily.
 
 0.746
lagD
lactococcin-G-processing and transport ATP-binding protein LagD.
  
 0.742
emrB_1
Multidrug export protein EmrB; Belongs to the major facilitator superfamily.
 
 0.730
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.719
emrK_4
Putative multidrug resistance protein EmrK.
  
     0.700
macB_1
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.694
emrK_1
Putative multidrug resistance protein EmrK.
 
     0.669
emrY
Putative multidrug resistance protein EmrY; Belongs to the major facilitator superfamily.
 
 0.666
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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