STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97584.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
AQR97583.1
Hypothetical protein.
 
     0.708
spoT
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase.
     
 0.598
AQR97956.1
Bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon.
  
     0.536
AQR97586.1
Hypothetical protein.
       0.535
AQR94694.1
DNA-binding transcriptional repressor FabR.
  
     0.517
AQR94526.1
Hypothetical protein.
  
    0.481
AQR97587.1
YmaF family protein.
 
     0.425
AQR94721.1
Hypothetical protein.
  
     0.423
AQR95678.1
Hypothetical protein.
  
     0.419
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.418
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.