STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97599.1Zinc-type alcohol dehydrogenase-like protein. (328 aa)    
Predicted Functional Partners:
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.987
AQR94628.1
long-chain-fatty-acid--AMP ligase FadD32.
  
 0.909
AQR97917.1
long-chain-fatty-acid--AMP ligase FadD29.
  
 0.892
AQR96122.1
Hypothetical protein.
  
 0.806
grsB
Gramicidin S synthase 2.
  
 
 0.782
adhE_3
Aldehyde-alcohol dehydrogenase.
  
 0.761
adhE_5
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.761
mtrR_3
HTH-type transcriptional regulator MtrR.
 
   
 0.692
mbtB
Phenyloxazoline synthase MbtB.
  
 
 0.661
gbsA
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.652
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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