STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97603.1Hypothetical protein; Resolvase, N terminal domain. (105 aa)    
Predicted Functional Partners:
AQR97602.1
Recombinase.
 
     0.946
AQR98121.1
Phage capsid family protein.
 
  
 0.715
pin
Recombinase.
 
     0.712
AQR97601.1
Hypothetical protein.
       0.693
AQR98123.1
Phage portal protein.
 
   
 0.644
AQR97916.1
Hypothetical protein.
  
     0.607
AQR95521.1
Phage antirepressor protein KilAC domain protein.
 
   
 0.462
AQR95547.1
Terminase small subunit.
  
    0.461
AQR97600.1
Hypothetical protein.
       0.451
dsbD
Thiol:disulfide interchange protein DsbD precursor.
   
    0.446
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.