STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97627.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
AQR93480.1
Hypothetical protein.
   
 
 0.610
AQR94796.1
Hypothetical protein.
   
 
 0.610
AQR96246.1
DNA-binding transcriptional repressor PuuR.
   
 
 0.610
AQR97676.1
Hypothetical protein.
   
 
 0.610
AQR98025.1
Ureidoglycolate lyase.
     
  0.507
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
  0.482
AQR97625.1
Hypothetical protein.
       0.476
AQR97626.1
Radical SAM superfamily protein.
       0.476
AQR97628.1
Hypothetical protein.
       0.467
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.