STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxA_3Thioredoxin; Belongs to the thioredoxin family. (102 aa)    
Predicted Functional Partners:
trxB_2
Thioredoxin reductase.
 
 
 0.907
trxB_1
Thioredoxin reductase.
 
 
 0.831
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.739
hcnB_3
Hydrogen cyanide synthase subunit HcnB.
  
 
 0.652
htpG
Chaperone protein HtpG.
 
 
 0.647
AQR95906.1
Hypothetical protein.
  
 
 0.644
AQR93232.1
ferredoxin--NADP reductase.
  
 
 0.638
hcnB_1
Hydrogen cyanide synthase subunit HcnB.
  
 
 0.638
gltB_2
Ferredoxin-dependent glutamate synthase 1.
   
 
 0.626
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.621
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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