STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspC2_2Small, acid-soluble spore protein C2. (62 aa)    
Predicted Functional Partners:
gpr
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.765
spoVAC1
SpoVA protein.
  
  
 0.750
spoVAD_1
Stage V sporulation protein AD.
  
  
 0.742
spoIIIAC
Stage III sporulation protein AC/AD protein family protein.
  
     0.741
yqfd
Putative stage IV sporulation protein YqfD.
 
     0.736
spoVT_1
Stage V sporulation protein T.
  
  
 0.714
tepA
Translocation-enhancing protein TepA.
  
     0.708
ylbJ
Sporulation integral membrane protein YlbJ.
  
     0.699
spoIIID
Stage III sporulation protein D.
  
  
 0.697
spoIIP
Stage II sporulation protein SpoIIP.
  
     0.694
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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