Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
glcK_2Glucokinase. (292 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 0.981
glcB
PTS system glucoside-specific EIICBA component.
  
 0.969
pgcA
Phosphoglucomutase.
  
 
 0.955
mro
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
 
 0.934
yihX
alpha-D-glucose-1-phosphate phosphatase YihX.
   
 
 0.928
glcK_1
Glucokinase.
  
  
 
0.921
glcK_3
Glucokinase.
  
  
 
0.918
cbgA_2
Beta-galactosidase.
    
 0.910
ebgA
Evolved beta-galactosidase subunit alpha.
    
 0.910
crr_1
Glucose-specific phosphotransferase enzyme IIA component.
  
 
 0.910
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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