Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQR97708.1 | aroD | CLSAP_50410 | CLSAP_50350 | Xylose isomerase-like TIM barrel. | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.473 |
| AQR97708.1 | aroE_1 | CLSAP_50410 | CLSAP_47850 | Xylose isomerase-like TIM barrel. | Shikimate dehydrogenase. | 0.601 |
| AQR97708.1 | aroE_2 | CLSAP_50410 | CLSAP_50360 | Xylose isomerase-like TIM barrel. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.642 |
| AQR97708.1 | aroE_3 | CLSAP_50410 | CLSAP_50390 | Xylose isomerase-like TIM barrel. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.784 |
| AQR97708.1 | aroE_4 | CLSAP_50410 | CLSAP_50520 | Xylose isomerase-like TIM barrel. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.617 |
| AQR97708.1 | gltC_6 | CLSAP_50410 | CLSAP_50420 | Xylose isomerase-like TIM barrel. | HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family. | 0.762 |
| AQR97708.1 | ydiM | CLSAP_50410 | CLSAP_50380 | Xylose isomerase-like TIM barrel. | Inner membrane transport protein YdiM. | 0.833 |
| AQR97711.1 | aroE_1 | CLSAP_50440 | CLSAP_47850 | NADH oxidase. | Shikimate dehydrogenase. | 0.712 |
| AQR97711.1 | aroE_2 | CLSAP_50440 | CLSAP_50360 | NADH oxidase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.412 |
| AQR97711.1 | gltB_2 | CLSAP_50440 | CLSAP_42030 | NADH oxidase. | Ferredoxin-dependent glutamate synthase 1. | 0.656 |
| AQR97711.1 | gltC_6 | CLSAP_50440 | CLSAP_50420 | NADH oxidase. | HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family. | 0.483 |
| AQR97711.1 | ydiM | CLSAP_50440 | CLSAP_50380 | NADH oxidase. | Inner membrane transport protein YdiM. | 0.568 |
| aroD | AQR97708.1 | CLSAP_50350 | CLSAP_50410 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Xylose isomerase-like TIM barrel. | 0.473 |
| aroD | aroE_1 | CLSAP_50350 | CLSAP_47850 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Shikimate dehydrogenase. | 0.932 |
| aroD | aroE_2 | CLSAP_50350 | CLSAP_50360 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.997 |
| aroD | aroE_3 | CLSAP_50350 | CLSAP_50390 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.980 |
| aroD | aroE_4 | CLSAP_50350 | CLSAP_50520 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.998 |
| aroD | gltB_2 | CLSAP_50350 | CLSAP_42030 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Ferredoxin-dependent glutamate synthase 1. | 0.424 |
| aroD | gltC_6 | CLSAP_50350 | CLSAP_50420 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family. | 0.476 |
| aroD | ydiM | CLSAP_50350 | CLSAP_50380 | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Inner membrane transport protein YdiM. | 0.828 |
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