STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97738.1ATPase family. (361 aa)    
Predicted Functional Partners:
AQR97737.1
Hypothetical protein.
 
    0.937
AQR97739.1
Hypothetical protein.
 
     0.926
soj
Sporulation initiation inhibitor protein Soj.
    
 0.656
AQR97736.1
Hypothetical protein.
       0.633
AQR95035.1
Hypothetical protein.
  
     0.624
cobB_1
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.609
AQR93234.1
Endodeoxyribonuclease RusA.
  
    0.608
speA_1
Arginine decarboxylase.
   
 
 0.593
speA_2
Arginine decarboxylase.
   
 
 0.593
mop
Aldehyde oxidoreductase.
    
 0.592
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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