STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
licB_7Lichenan-specific phosphotransferase enzyme IIB component. (102 aa)    
Predicted Functional Partners:
licA_8
Lichenan-specific phosphotransferase enzyme IIA component.
 
 0.981
licA_2
Lichenan-specific phosphotransferase enzyme IIA component.
 
 0.952
licA_4
Lichenan-specific phosphotransferase enzyme IIA component.
 
 0.952
licA_6
Lichenan-specific phosphotransferase enzyme IIA component.
 
 0.952
licC_10
Lichenan permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.952
licA_1
Lichenan-specific phosphotransferase enzyme IIA component.
 
 0.950
licA_3
Lichenan-specific phosphotransferase enzyme IIA component.
 
 0.950
licA_5
Lichenan-specific phosphotransferase enzyme IIA component.
 
 0.950
licA_7
Lichenan-specific phosphotransferase enzyme IIA component.
 
 0.950
licC_3
Lichenan permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.948
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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