STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97828.1Hypothetical protein; Bactoprenol glucosyl transferase homolog from prophage CPS-53. (313 aa)    
Predicted Functional Partners:
AQR97829.1
FAD dependent oxidoreductase.
 
     0.930
AQR97831.1
Hypothetical protein.
 
  
 0.899
AQR97830.1
Xylose isomerase-like TIM barrel.
 
     0.883
arnC_2
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
 
     0.798
ykoT
Putative glycosyltransferase YkoT.
  
     0.772
AQR97832.1
GtrA-like protein.
  
 
 0.686
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.584
rfbD
UDP-galactopyranose mutase precursor.
  
 0.573
tagH
Teichoic acids export ATP-binding protein TagH.
 
  
 0.551
tagG
Teichoic acid translocation permease protein TagG.
 
  
 0.520
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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