Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQR97832.1GtrA-like protein. (140 aa)    
Predicted Functional Partners:
AQR97828.1
Hypothetical protein; Bactoprenol glucosyl transferase homolog from prophage CPS-53.
  
 
 0.697
arnC_2
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
  
 
 0.689
AQR97831.1
Hypothetical protein.
  
  
 0.630
AQR97830.1
Xylose isomerase-like TIM barrel.
       0.576
AQR97829.1
FAD dependent oxidoreductase.
       0.567
AQR97847.1
O-antigen ligase.
  
    0.541
wfgD
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD.
  
 
 0.536
rmlD_2
dTDP-4-dehydrorhamnose reductase.
  
  
 0.527
AQR97833.1
Hypothetical protein.
     
 0.506
tagG
Teichoic acid translocation permease protein TagG.
  
  
 0.488
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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