STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX65708.1Hypothetical protein. (467 aa)    
Predicted Functional Partners:
ALX65707.1
Hypothetical protein.
 
  
 0.925
gcvT
Hypothetical protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.741
ALX65706.1
Hypothetical protein.
       0.589
ALX66961.1
Glutamate synthase.
  
  
 0.573
ALX65538.1
Lactate dehydrogenase.
   
 
 0.453
ALX65705.1
Hypothetical protein.
  
    0.440
ALX65704.1
Hypothetical protein.
       0.427
ALX65571.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.423
ALX65659.1
Amidase.
  
    0.415
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.