Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX65729.1Hypothetical protein. (399 aa)    
Predicted Functional Partners:
ALX65721.1
Hypothetical protein.
 
 0.957
ALX65725.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.926
ALX65722.1
Hypothetical protein.
 
 
 0.907
ALX65728.1
Hypothetical protein; Belongs to the HIBADH-related family.
 
  
 0.865
ALX66526.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.716
ALX66525.1
Hypothetical protein.
  
 0.707
ALX65897.1
Hypothetical protein.
  
 0.674
ALX66861.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.674
ALX65731.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.669
ALX66599.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.669
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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