ALX65780.1 protein (Microbacterium sp. XT11)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ALX65780.1

Tail protein. (1358 aa)

Predicted Functional Partners:

ALX65776.1

0.746

ALX65784.1

0.721

ALX65782.1

0.667

ALX65849.1

0.652

ALX66430.1

0.650

ALX67283.1

0.618

ALX65777.1

0.609

ALX66046.1

0.559

ALX67153.1

0.559

ALX66163.1

0.551

Your Current Organism:

Microbacterium sp. XT11

NCBI taxonomy Id: 367477
Other names: M. sp. XT11

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALX65776.1	ALX65777.1	AB663_000477	AB663_000480	Hypothetical protein.	Hypothetical protein.	0.770
ALX65776.1	ALX65780.1	AB663_000477	AB663_000486	Hypothetical protein.	Tail protein.	0.746
ALX65776.1	ALX65782.1	AB663_000477	AB663_000489	Hypothetical protein.	Hypothetical protein.	0.862
ALX65776.1	ALX65784.1	AB663_000477	AB663_000491	Hypothetical protein.	Hypothetical protein.	0.547
ALX65776.1	ALX65849.1	AB663_000477	AB663_000609	Hypothetical protein.	Glycosyltransferase.	0.618
ALX65777.1	ALX65776.1	AB663_000480	AB663_000477	Hypothetical protein.	Hypothetical protein.	0.770
ALX65777.1	ALX65780.1	AB663_000480	AB663_000486	Hypothetical protein.	Tail protein.	0.609
ALX65777.1	ALX65782.1	AB663_000480	AB663_000489	Hypothetical protein.	Hypothetical protein.	0.409
ALX65777.1	ALX65784.1	AB663_000480	AB663_000491	Hypothetical protein.	Hypothetical protein.	0.497
ALX65777.1	ALX65849.1	AB663_000480	AB663_000609	Hypothetical protein.	Glycosyltransferase.	0.661
ALX65780.1	ALX65776.1	AB663_000486	AB663_000477	Tail protein.	Hypothetical protein.	0.746
ALX65780.1	ALX65777.1	AB663_000486	AB663_000480	Tail protein.	Hypothetical protein.	0.609
ALX65780.1	ALX65782.1	AB663_000486	AB663_000489	Tail protein.	Hypothetical protein.	0.667
ALX65780.1	ALX65784.1	AB663_000486	AB663_000491	Tail protein.	Hypothetical protein.	0.721
ALX65780.1	ALX65849.1	AB663_000486	AB663_000609	Tail protein.	Glycosyltransferase.	0.652
ALX65780.1	ALX66046.1	AB663_000486	AB663_000921	Tail protein.	Hypothetical protein.	0.559
ALX65780.1	ALX66163.1	AB663_000486	AB663_001095	Tail protein.	Hypothetical protein.	0.551
ALX65780.1	ALX66430.1	AB663_000486	AB663_001591	Tail protein.	Hypothetical protein.	0.650
ALX65780.1	ALX67153.1	AB663_000486	AB663_002880	Tail protein.	Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.	0.559
ALX65780.1	ALX67283.1	AB663_000486	AB663_003142	Tail protein.	P4 family phage/plasmid primase.	0.618