Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALX65826.1 | ALX65904.1 | AB663_000558 | AB663_000699 | Manganese transporter. | Hypothetical protein. | 0.435 |
ALX65903.1 | ALX65904.1 | AB663_000696 | AB663_000699 | Peptide ABC transporter substrate-binding protein; Belongs to the Fur family. | Hypothetical protein. | 0.611 |
ALX65904.1 | ALX65826.1 | AB663_000699 | AB663_000558 | Hypothetical protein. | Manganese transporter. | 0.435 |
ALX65904.1 | ALX65903.1 | AB663_000699 | AB663_000696 | Hypothetical protein. | Peptide ABC transporter substrate-binding protein; Belongs to the Fur family. | 0.611 |
ALX65904.1 | ALX65905.1 | AB663_000699 | AB663_000700 | Hypothetical protein. | Hypothetical protein. | 0.638 |
ALX65904.1 | ALX65906.1 | AB663_000699 | AB663_000701 | Hypothetical protein. | ABC transporter permease. | 0.454 |
ALX65904.1 | ALX65907.1 | AB663_000699 | AB663_000702 | Hypothetical protein. | Sugar ABC transporter permease. | 0.454 |
ALX65904.1 | ALX67078.1 | AB663_000699 | AB663_002756 | Hypothetical protein. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.400 |
ALX65904.1 | ribA-2 | AB663_000699 | AB663_001793 | Hypothetical protein. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | 0.446 |
ALX65904.1 | rpsN | AB663_000699 | AB663_000679 | Hypothetical protein. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.758 |
ALX65905.1 | ALX65904.1 | AB663_000700 | AB663_000699 | Hypothetical protein. | Hypothetical protein. | 0.638 |
ALX65905.1 | ALX65906.1 | AB663_000700 | AB663_000701 | Hypothetical protein. | ABC transporter permease. | 0.763 |
ALX65905.1 | ALX65907.1 | AB663_000700 | AB663_000702 | Hypothetical protein. | Sugar ABC transporter permease. | 0.774 |
ALX65906.1 | ALX65904.1 | AB663_000701 | AB663_000699 | ABC transporter permease. | Hypothetical protein. | 0.454 |
ALX65906.1 | ALX65905.1 | AB663_000701 | AB663_000700 | ABC transporter permease. | Hypothetical protein. | 0.763 |
ALX65906.1 | ALX65907.1 | AB663_000701 | AB663_000702 | ABC transporter permease. | Sugar ABC transporter permease. | 0.994 |
ALX65907.1 | ALX65904.1 | AB663_000702 | AB663_000699 | Sugar ABC transporter permease. | Hypothetical protein. | 0.454 |
ALX65907.1 | ALX65905.1 | AB663_000702 | AB663_000700 | Sugar ABC transporter permease. | Hypothetical protein. | 0.774 |
ALX65907.1 | ALX65906.1 | AB663_000702 | AB663_000701 | Sugar ABC transporter permease. | ABC transporter permease. | 0.994 |
ALX67078.1 | ALX65904.1 | AB663_002756 | AB663_000699 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Hypothetical protein. | 0.400 |
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