STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX66043.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
ALX65680.1
Hypothetical protein.
   
  
 0.739
ALX66498.1
Hypothetical protein.
 
  
 0.712
ALX65874.1
Hypothetical protein.
   
  
 0.693
ALX67195.1
AraC-family transcriptional regulator.
   
  
 0.693
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
      
 0.537
ALX66042.1
Hypothetical protein.
       0.525
ALX67403.1
Hypothetical protein.
  
    0.512
ALX65792.1
Hypothetical protein.
  
    0.490
ALX66529.1
Hypothetical protein; Belongs to the PEP-utilizing enzyme family.
     
 0.479
ALX66162.1
Transcriptional regulator.
  
   
 0.437
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.