STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX66103.1Hypothetical protein. (261 aa)    
Predicted Functional Partners:
ALX66102.1
ABC transporter permease.
 
 
 0.977
ALX67206.1
Hypothetical protein.
 
 
 0.909
ALX66385.1
Hypothetical protein.
 
 
 0.905
ALX66104.1
Hypothetical protein.
 
     0.886
ALX66081.1
Hypothetical protein.
 
   
 
0.857
ALX66105.1
Hypothetical protein.
 
    0.846
ALX65774.1
Hypothetical protein.
 
 
 0.712
ALX66346.1
Antibiotic ABC transporter permease.
 
 0.661
ALX66511.1
Hypothetical protein.
  
 
 0.589
ALX67387.1
Hypothetical protein.
  
  
  0.549
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.