Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX66125.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
ALX66978.1
(2Fe-2S)-binding protein.
  
     0.591
ALX66742.1
Hypothetical protein.
  
     0.500
ALX65618.1
Hypothetical protein.
  
     0.498
ALX66744.1
Hypothetical protein.
  
     0.456
ALX66852.1
Hypothetical protein.
  
     0.430
ALX67110.1
Hypothetical protein.
  
     0.418
ALX66423.1
Hypothetical protein.
  
     0.416
ALX66708.1
Hypothetical protein.
  
     0.414
ALX67336.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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