Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALX66127.1Carboxylate-amine ligase,YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (386 aa)    
Predicted Functional Partners:
ALX66862.1
Hypothetical protein.
     
 0.903
pepA
Hypothetical protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
  0.900
purQ
Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in [...]
  
  
  0.822
ALX65717.1
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.810
ALX65840.1
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.810
ALX65633.1
Hypothetical protein; Belongs to the glutamine synthetase family.
     
  0.800
ALX65790.1
Cysteine synthase.
     
  0.800
ALX66298.1
Aspartate/glutamate racemase.
     
  0.800
ALX66661.1
Class I and II aminotransferase protein.
     
  0.800
ALX66747.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
  0.800
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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