Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX66133.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
ALX66135.1
ABC transporter permease.
 
     0.848
ALX67033.1
Hypothetical protein.
   
 
 0.816
ALX67039.1
Hypothetical protein; Belongs to the flagella basal body rod proteins family.
   
 
 0.779
ALX66136.1
Hypothetical protein.
  
     0.741
ALX66134.1
Hypothetical protein.
       0.716
ALX67037.1
Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
 
 0.682
fliE
Hypothetical protein.
   
 
 0.671
ALX65565.1
Hypothetical protein.
  
 
 0.646
ALX67025.1
Hypothetical protein.
   
 
 0.622
ALX66699.1
Hypothetical protein.
    
 0.602
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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