STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX66135.1ABC transporter permease. (270 aa)    
Predicted Functional Partners:
ALX66136.1
Hypothetical protein.
 
 
 0.854
ALX66427.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.851
ALX66133.1
Hypothetical protein.
 
     0.848
ALX66166.1
ABC-type sugar transport systems,permease components.
 
 
 0.832
ALX65862.1
Permease component of ABC-type sugar transporter.
   0.824
ALX66452.1
Hypothetical protein.
   0.779
ALX65744.1
Hypothetical protein.
 
   0.758
ALX65794.1
Hypothetical protein.
   0.747
ALX66783.1
lactose/L-arabinose transport system permease.
 
   0.739
ALX65935.1
ABC transporter permease.
 
 
 0.728
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.