Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX66157.1Hypothetical protein. (575 aa)    
Predicted Functional Partners:
ALX66156.1
Hypothetical protein.
 
     0.824
ALX67181.1
Hypothetical protein.
   
 
 0.724
truB
Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
    
  0.493
ALX66155.1
Hypothetical protein.
       0.477
ALX66154.1
Hypothetical protein.
  
 
 0.452
ALX65899.1
Hypothetical protein.
   
 0.414
ALX65994.1
FAD-binding monooxygenase.
   
 0.414
ALX66509.1
Phenol 2-monooxygenase.
   
 0.414
ALX66601.1
2-polyprenyl-6-methoxyphenol hydroxylase.
   
 0.414
ALX66619.1
2-polyprenyl-6-methoxyphenol hydroxylase.
   
 0.414
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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