Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX66165.1ABC-type sugar transport system,periplasmic component. (460 aa)    
Predicted Functional Partners:
ALX66166.1
ABC-type sugar transport systems,permease components.
 
 0.962
ALX66167.1
ABC-type sugar transport system,permease component.
 
  0.882
ALX66314.1
Hypothetical protein.
 
  0.847
ALX66211.1
Hypothetical protein.
  
  
  0.715
ALX65613.1
Hypothetical protein.
  
  0.704
ALX66109.1
Hypothetical protein.
  
  
  0.697
ALX65907.1
Sugar ABC transporter permease.
  
 0.654
ALX66481.1
Sugar ABC transporter permease.
  
 0.654
ALX66603.1
Hypothetical protein.
  
  
  0.646
ALX67387.1
Hypothetical protein.
  
  
 0.645
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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