Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALX66409.1 | ALX66410.1 | AB663_001560 | AB663_001561 | LuxR family transcriptional regulator. | ABC transporter. | 0.454 |
ALX66409.1 | ALX66411.1 | AB663_001560 | AB663_001562 | LuxR family transcriptional regulator. | Hypothetical protein. | 0.468 |
ALX66410.1 | ALX66409.1 | AB663_001561 | AB663_001560 | ABC transporter. | LuxR family transcriptional regulator. | 0.454 |
ALX66410.1 | ALX66411.1 | AB663_001561 | AB663_001562 | ABC transporter. | Hypothetical protein. | 0.998 |
ALX66410.1 | ALX66412.1 | AB663_001561 | AB663_001563 | ABC transporter. | Hypothetical protein; Belongs to the ComB family. | 0.573 |
ALX66410.1 | ALX66417.1 | AB663_001561 | AB663_001568 | ABC transporter. | Hypothetical protein. | 0.901 |
ALX66410.1 | ALX66581.1 | AB663_001561 | AB663_001837 | ABC transporter. | UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.406 |
ALX66410.1 | ALX66699.1 | AB663_001561 | AB663_002036 | ABC transporter. | Hypothetical protein. | 0.527 |
ALX66410.1 | ALX67207.1 | AB663_001561 | AB663_002968 | ABC transporter. | Protein of unknown function DUF214. | 0.984 |
ALX66410.1 | ALX67331.1 | AB663_001561 | AB663_003228 | ABC transporter. | Hypothetical protein. | 0.863 |
ALX66410.1 | ALX67347.1 | AB663_001561 | AB663_003248 | ABC transporter. | Hypothetical protein. | 0.508 |
ALX66410.1 | rpsK | AB663_001561 | AB663_000142 | ABC transporter. | SSU ribosomal protein S11p (S14e); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.442 |
ALX66411.1 | ALX66409.1 | AB663_001562 | AB663_001560 | Hypothetical protein. | LuxR family transcriptional regulator. | 0.468 |
ALX66411.1 | ALX66410.1 | AB663_001562 | AB663_001561 | Hypothetical protein. | ABC transporter. | 0.998 |
ALX66411.1 | ALX66412.1 | AB663_001562 | AB663_001563 | Hypothetical protein. | Hypothetical protein; Belongs to the ComB family. | 0.565 |
ALX66411.1 | ALX66417.1 | AB663_001562 | AB663_001568 | Hypothetical protein. | Hypothetical protein. | 0.900 |
ALX66411.1 | ALX67207.1 | AB663_001562 | AB663_002968 | Hypothetical protein. | Protein of unknown function DUF214. | 0.551 |
ALX66412.1 | ALX66410.1 | AB663_001563 | AB663_001561 | Hypothetical protein; Belongs to the ComB family. | ABC transporter. | 0.573 |
ALX66412.1 | ALX66411.1 | AB663_001563 | AB663_001562 | Hypothetical protein; Belongs to the ComB family. | Hypothetical protein. | 0.565 |
ALX66417.1 | ALX66410.1 | AB663_001568 | AB663_001561 | Hypothetical protein. | ABC transporter. | 0.901 |
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