STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX66548.1ABC transporter permease. (294 aa)    
Predicted Functional Partners:
ALX66547.1
Hypothetical protein.
 
 
 0.940
ALX66549.1
ABC transporter permease.
  
0.908
ALX65744.1
Hypothetical protein.
   0.870
ALX65745.1
Hypothetical protein.
 
 
 0.849
ALX66481.1
Sugar ABC transporter permease.
 
 0.799
ALX66166.1
ABC-type sugar transport systems,permease components.
 
 0.770
ALX66783.1
lactose/L-arabinose transport system permease.
   0.727
ALX66221.1
Hypothetical protein.
 
 0.715
ALX66427.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.677
ALX65862.1
Permease component of ABC-type sugar transporter.
   0.656
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.