STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX66596.1Protocatechuate 4,5-dioxygenase subunit alpha. (185 aa)    
Predicted Functional Partners:
ALX66623.1
4-hydroxybenzoate 3-monooxygenase.
 
 
 0.984
ALX66597.1
Putative hydrolase or acyltransferase.
 
   
 0.793
ALX66292.1
Hypothetical protein.
 
  
 0.663
ALX66598.1
Acyl CoA:acetate/3-ketoacid CoA transferase,beta subunit.
 
  
 0.520
ALX66520.1
Ferredoxin.
  
  
 0.468
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.