Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX66680.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
ALX66693.1
Hypothetical protein.
 
  
 0.800
ALX67393.1
Hypothetical protein.
  
     0.766
ALX66023.1
Hypothetical protein.
  
     0.765
ALX66698.1
Hypothetical protein.
  
     0.764
ALX65922.1
Hypothetical protein.
  
     0.758
ALX67110.1
Hypothetical protein.
  
  
 0.742
ALX66491.1
Acetyltransferase.
 
    0.729
ALX66305.1
Hypothetical protein.
  
     0.722
ALX66328.1
Hypothetical protein.
   
 0.717
ALX67294.1
Hypothetical protein.
  
     0.717
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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