Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX66782.1lactose/L-arabinose transport system substrate-binding protein. (428 aa)    
Predicted Functional Partners:
ALX66783.1
lactose/L-arabinose transport system permease.
 
  0.975
ALX66784.1
ABC-type transporter,integral membrane subunit.
 
  0.962
ALX65613.1
Hypothetical protein.
  
  0.866
ALX65614.1
Hypothetical protein.
     
 0.802
ALX66083.1
Hypothetical protein.
   
 
 0.778
ALX66100.1
Hypothetical protein.
     
  0.777
ALX66101.1
Hypothetical protein.
     
  0.777
ALX66689.1
Hypothetical protein.
  
  
  0.743
ALX67206.1
Hypothetical protein.
     
  0.740
ALX66785.1
Beta glycosidase.
 
     0.722
Your Current Organism:
Microbacterium sp. XT11
NCBI taxonomy Id: 367477
Other names: M. sp. XT11
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