Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALX66032.1 | ALX67006.1 | AB663_000891 | AB663_002609 | Hypothetical protein; Belongs to the SEDS family. | Hypothetical protein. | 0.589 |
ALX66032.1 | ALX67167.1 | AB663_000891 | AB663_002910 | Hypothetical protein; Belongs to the SEDS family. | Hypothetical protein. | 0.975 |
ALX66032.1 | ddl | AB663_000891 | AB663_001137 | Hypothetical protein; Belongs to the SEDS family. | Hypothetical protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.629 |
ALX66032.1 | mraY | AB663_000891 | AB663_002908 | Hypothetical protein; Belongs to the SEDS family. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.856 |
ALX66032.1 | murA | AB663_000891 | AB663_002353 | Hypothetical protein; Belongs to the SEDS family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.603 |
ALX66032.1 | murB | AB663_000891 | AB663_000134 | Hypothetical protein; Belongs to the SEDS family. | Hypothetical protein; Cell wall formation. | 0.519 |
ALX66032.1 | murC | AB663_000891 | AB663_002904 | Hypothetical protein; Belongs to the SEDS family. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.890 |
ALX66032.1 | murF | AB663_000891 | AB663_002909 | Hypothetical protein; Belongs to the SEDS family. | Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.683 |
ALX66032.1 | rsmH | AB663_000891 | AB663_002912 | Hypothetical protein; Belongs to the SEDS family. | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.429 |
ALX66032.1 | uppP | AB663_000891 | AB663_002479 | Hypothetical protein; Belongs to the SEDS family. | Hypothetical protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.504 |
ALX67006.1 | ALX66032.1 | AB663_002609 | AB663_000891 | Hypothetical protein. | Hypothetical protein; Belongs to the SEDS family. | 0.589 |
ALX67006.1 | ALX67167.1 | AB663_002609 | AB663_002910 | Hypothetical protein. | Hypothetical protein. | 0.748 |
ALX67006.1 | ddl | AB663_002609 | AB663_001137 | Hypothetical protein. | Hypothetical protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.532 |
ALX67006.1 | mraY | AB663_002609 | AB663_002908 | Hypothetical protein. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.805 |
ALX67006.1 | murB | AB663_002609 | AB663_000134 | Hypothetical protein. | Hypothetical protein; Cell wall formation. | 0.404 |
ALX67006.1 | murC | AB663_002609 | AB663_002904 | Hypothetical protein. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.638 |
ALX67006.1 | murF | AB663_002609 | AB663_002909 | Hypothetical protein. | Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.887 |
ALX67006.1 | rsmH | AB663_002609 | AB663_002912 | Hypothetical protein. | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.458 |
ALX67167.1 | ALX66032.1 | AB663_002910 | AB663_000891 | Hypothetical protein. | Hypothetical protein; Belongs to the SEDS family. | 0.975 |
ALX67167.1 | ALX67006.1 | AB663_002910 | AB663_002609 | Hypothetical protein. | Hypothetical protein. | 0.748 |
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