STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abu_0407Conserved hypothetical protein. (235 aa)    
Predicted Functional Partners:
Abu_0406
Phospholipid/glycerol acyltransferase, possible hemolysin; Pfam match to PF01553 Acyltransferase, score 32.2, E-value 1.3E-008.
 
     0.651
Abu_1799
Pfam match to PF00884 Sulfatase, score 128.1, E-value 2.3E-035.
  
     0.575
Abu_1106
ABC transporter, ATP-binding protein; Pfam match to PF00005 ABC_tran, score 166.4, E-value 6.6E-047.
 
     0.496
Abu_1728
Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain; Pfam matches to PF01966 HD, score 104.9, E-value 2.1E-028, and to PF08447 PAS_3, score 82.2, E-value 1.5E-021, and to PF00072 Response_reg, score 67, E-value 4.5E-020, and to PF08447 PAS_3, score 48.4, E-value 1E-012.
  
     0.426
Abu_0453
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 108.1, E-value 1.1E-032, and to PF01966 HD, score 105.3, E-value 1.6E-028, and to PF08447 PAS_3, score 52.1, E-value 9.9E-014, and to PF00989 PAS, score 39.4, E-value 2.1E-011.
  
     0.404
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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