STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abu_0415Two-component sensor histidine kinase; Pfam match to PF02518 HATPase_c, score 24.6, E-value 1.5E-006. (411 aa)    
Predicted Functional Partners:
ompR
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 118.1, E-value 9.6E-036, and to PF00486 Trans_reg_C, score 52.4, E-value 1.4E-012.
 
 
 0.922
Abu_0375
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 116.6, E-value 2.8E-035, and to PF00486 Trans_reg_C, score 78, E-value 2.7E-020.
  
 
 0.686
Abu_0420
Two-component sensor histidine kinase; Pfam matches to PF02518 HATPase_c, score 69.6, E-value 8.8E-018, and to PF00989 PAS, score 43.6, E-value 1.1E-012, and to PF00512 HisKA, score 36.7, E-value 7.1E-008, and to PF00989 PAS, score 22.5, E-value 2.5E-006.
 
 
 
 0.684
Abu_0434
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 131.1, E-value 1.1E-039, and to PF00486 Trans_reg_C, score 66.7, E-value 6.7E-017.
  
 
 0.683
Abu_0453
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 108.1, E-value 1.1E-032, and to PF01966 HD, score 105.3, E-value 1.6E-028, and to PF08447 PAS_3, score 52.1, E-value 9.9E-014, and to PF00989 PAS, score 39.4, E-value 2.1E-011.
  
 
 0.665
Abu_1728
Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain; Pfam matches to PF01966 HD, score 104.9, E-value 2.1E-028, and to PF08447 PAS_3, score 82.2, E-value 1.5E-021, and to PF00072 Response_reg, score 67, E-value 4.5E-020, and to PF08447 PAS_3, score 48.4, E-value 1E-012.
  
 
 0.665
Abu_0413
Hypothetical periplasmic protein.
       0.663
Abu_1160
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 112, E-value 7.1E-034, and to PF00486 Trans_reg_C, score 56.1, E-value 1E-013.
 
 
 0.663
Abu_0416
Conserved hypothetical protein; Pfam match to PF03486 HI0933_like, score 248.6, E-value 1.2E-071.
  
    0.632
Abu_0419
Two-component sensor histidine kinase; Pfam match to PF08447 PAS_3, score 63.8, E-value 5.9E-017.
   
 
 0.629
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.