STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abu_0713Conserved hypothetical protein. (116 aa)    
Predicted Functional Partners:
Abu_0711
Heavy metal translocating P-type ATPase; Pfam matches to PF00122 E1-E2_ATPase, score 100.8, E-value 2.2E-030, and to PF00702 Hydrolase, score 105.1, E-value 1.2E-029.
       0.802
Abu_0716
Conserved hypothetical protein.
       0.802
Abu_0715
Conserved hypothetical protein.
       0.801
Abu_0712
Conserved hypothetical protein.
       0.786
Abu_0714
Hypothetical protein.
       0.775
fur1
Ferric uptake regulation protein; Pfam match to PF01475 FUR, score 118.7, E-value 1.5E-032; Belongs to the Fur family.
       0.594
Abu_0718
Hypothetical protein.
       0.414
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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