STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abu_1112Conserved hypothetical protein. (271 aa)    
Predicted Functional Partners:
fliS
Flagellar protein FliS; Pfam match to PF02561 FliS, score 87.3, E-value 4.2E-023.
 
 
 0.943
flaB
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 
0.912
flaA
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 
0.911
fliY
Flagellar motor switch protein FliY; Pfam match to PF01052 SpoA, score 66.7, E-value 6.6E-017.
 
 
 0.901
fliD
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.785
flgK
Flagellar hook-associated protein FlgK; Pfam matches to PF06429 DUF1078, score 45.5, E-value 1.6E-010, and to PF00460 Flg_bb_rod, score 40.6, E-value 4.8E-009; Belongs to the flagella basal body rod proteins family.
 
  
 0.710
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
 
 0.672
Abu_0239
Hypothetical protein (DUF180 domain protein); Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. Belongs to the FliW family.
  
 
 0.656
fliM
Flagellar motor switch protein FliM; Pfam matches to PF02154 FliM, score 186, E-value 8.3E-053, and to PF01052 SpoA, score 27.2, E-value 2.2E-005.
 
  
 0.652
fliE
Flagellar hook-basal body protein FliE; Pfam match to PF02049 FliE, score 64.8, E-value 2.5E-016.
 
 
 0.646
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.