STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abu_1663Hypothetical protein, putative baseplate assembly protein W; Pfam match to PF04965 GPW_gp25, score 26.4, E-value 1E-007. (105 aa)    
Predicted Functional Partners:
Abu_1660
Hypothetical protein.
       0.773
Abu_1661
Tail protein I, putative.
       0.773
Abu_1662
Baseplate assembly protein J, putative; Pfam match to PF04865 Baseplate_J, score 79.6, E-value 9.1E-021.
       0.773
Abu_1664
Baseplate assembly protein V, putative; Pfam match to PF04717 Phage_base_V, score 63.3, E-value 7.1E-016.
       0.773
Abu_1665
Hypothetical protein.
       0.773
Abu_1658
Hypothetical protein.
       0.757
Abu_1659
Tail fiber assembly protein; Pfam match to PF02413 Caudo_TAP, score 20.8, E-value 6.9E-006.
       0.757
Abu_1656
Phage major tail tube protein.
       0.675
Abu_1657
Phage tail sheath protein.
       0.675
Abu_1655
Hypothetical protein.
       0.657
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.