STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abu_2326Two-component sensor histidine kinase; Pfam matches to PF00672 HAMP, score 56.7, E-value 7.1E-014, and to PF02518 HATPase_c, score 28.9, E-value 1.6E-005. (396 aa)    
Predicted Functional Partners:
Abu_2325
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 116.3, E-value 3.5E-035, and to PF00486 Trans_reg_C, score 47.5, E-value 4E-011.
 
 
 0.963
Abu_2323
Hypothetical protein.
 
     0.814
ompR
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 118.1, E-value 9.6E-036, and to PF00486 Trans_reg_C, score 52.4, E-value 1.4E-012.
 
 
 0.801
Abu_2324
Hypothetical protein.
       0.798
Abu_0092
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 103.8, E-value 2.4E-031, and to PF00486 Trans_reg_C, score 42.4, E-value 1.4E-009.
 
 
 0.793
Abu_1160
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 112, E-value 7.1E-034, and to PF00486 Trans_reg_C, score 56.1, E-value 1E-013.
 
 
 0.793
Abu_2098
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 90.9, E-value 2.2E-027, and to PF00486 Trans_reg_C, score 63.9, E-value 4.8E-016.
 
 
 0.785
Abu_2320
Cytochrome c-type protein, putative.
 
     0.759
Abu_2321
Diheme cytochrome c precursor, putative.
 
     0.759
Abu_1108
Two-component response regulator; Pfam matches to PF00072 Response_reg, score 82.5, E-value 8.1E-025, and to PF00486 Trans_reg_C, score 79.5, E-value 9.6E-021.
  
 
 0.752
Your Current Organism:
Arcobacter butzleri
NCBI taxonomy Id: 367737
Other names: A. butzleri RM4018, Arcobacter butzleri RM4018, Arcobacter butzleri str. RM4018, Arcobacter butzleri strain RM4018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.