Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAD_0100COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0452; PFAM_ID: DUF214. (499 aa)    
Predicted Functional Partners:
BAD_0102
COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0450; PFAM_ID: ABC_tran.
 
   0.963
BAD_0099
Narrowly conserved hypothetical membrane protein; Orthologue of BL0453.
 
    0.947
BAD_0098
Hypothetical protein; COG family: predicted periplasmic_secreted protein; Orthologue of BL0454.
 
     0.893
BAD_0097
Widely conserved hypothetical membrane protein; COG family: high-affinity iron permease; Orthologue of BL0455.
 
     0.865
BAD_0101
COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0451; PFAM_ID: DUF214.
 
    
0.822
BAD_0695
Hypothetical protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0888; PFAM_ID: DUF214.
  
     0.769
BAD_0696
COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0887; PFAM_ID: ABC_tran.
  
   0.746
BAD_0103
Hypothetical protein; Orthologue of BL0449.
       0.719
BAD_0694
Hypothetical protein; Orthologue of BL0889.
 
    0.710
BAD_0510
COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL1135; PFAM_ID: ABC_tran.
  
   0.596
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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