Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAD_0102COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0450; PFAM_ID: ABC_tran. (291 aa)    
Predicted Functional Partners:
BAD_0101
COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0451; PFAM_ID: DUF214.
 
   0.972
BAD_0100
COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0452; PFAM_ID: DUF214.
 
   0.963
BAD_0099
Narrowly conserved hypothetical membrane protein; Orthologue of BL0453.
 
    0.921
BAD_0695
Hypothetical protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0888; PFAM_ID: DUF214.
 
  0.860
BAD_0604
Possible transport protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0931; PFAM_ID: DUF214.
 
 0.850
BAD_0098
Hypothetical protein; COG family: predicted periplasmic_secreted protein; Orthologue of BL0454.
 
     0.842
BAD_0512
Protein with weak similarity to components of ABC transporter; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL1133; PFAM_ID: DUF214.
 
  0.830
BAD_0097
Widely conserved hypothetical membrane protein; COG family: high-affinity iron permease; Orthologue of BL0455.
 
     0.826
BAD_0103
Hypothetical protein; Orthologue of BL0449.
  
    0.819
BAD_1065
Putative ABC transport system integral membrane protein; Orthologue of BL0932_SCO3110_nfa46550.
 
  0.664
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.