Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAD_0146Large protein with C-terminal homology to alpha-arabinofuranosidase II; Orthologue of BL0184. (354 aa)    
Predicted Functional Partners:
BAD_0149
Large protein with C-terminal homology to alpha-arabinofuranosidase II; Orthologue of BL0184; Belongs to the glycosyl hydrolase 43 family.
     0.963
xynD
Endo-1,4-beta-xylanase; Orthologue of SAV6381; Belongs to the glycosyl hydrolase 43 family.
  
  0.806
BAD_0152
exo-alpha-L-arabinofuranosidase II; Orthologue of BL0187; Belongs to the glycosyl hydrolase 43 family.
 
     0.524
leuA
Possible TetR-type transcriptional regulator; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
       0.419
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.417
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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