STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAD_0156Hypothetical protein; Orthologue of gll2003; Belongs to the glycosyl hydrolase 1 family. (423 aa)    
Predicted Functional Partners:
ptsG
COG family:phosphotransferase system IIb components; Glucose-permease IIABC; Orthologue of BL1632; PFAM_ID: PTS_EIIA_1; PFAM_ID: PTS_EIIC; PFAM_ID:PTS_EIIB; Phosphotransferase enzymeII_ ABC component.
  
 
 0.980
BAD_0155
COG family: sugar permeases; Orthologue of BL0190; PFAM_ID: BPD_transp.
       0.789
BAD_0154
COG family: ABC-type sugar transport systems_permease components; Orthologue of BL0189; PFAM_ID: BPD_transp.
  
    0.776
BAD_1287
Beta-glucosidase; Function Code: 5.1 Central Intermediary Metabolism:Degradation of polysaccharides; Orthologue of PF0442; Belongs to the glycosyl hydrolase 1 family.
  
     0.772
rmlCD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 
 0.714
BAD_0153
Solute binding protein of ABC transporter system; COG family: sugar-binding periplasmicproteins_domains; Orthologue of BL0188; PFAM_ID: SBP_bacterial_1.
 
     0.706
BAD_0436
Transcriptional regulator; Glucose kinase; Orthologue of LBA1367.
 
 
  0.699
xylS
Alpha-xylosidase; Orthologue of spr0284; Belongs to the glycosyl hydrolase 31 family.
  
 0.681
BAD_0439
Cellobiose-phosphorylase; Orthologue of TM1848; Similar to GP:3184120 percent identity: 97.66;identified by sequence similarity.
    
 0.677
BAD_1202
Probable beta-1,3-exoglucanase; COG family: endoglucanase; Orthologue of BL1761; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.662
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.