Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAD_0200Putative transcription factor; Orthologue of CE2422. (239 aa)    
Predicted Functional Partners:
BAD_0198
Gluconate permease; Orthologue of PPA0738.
 
   
 0.708
BAD_0199
Putative gluconokinase; Orthologue of SCO1679.
 
   
 0.648
BAD_0935
3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-acyl carrier protein reductase; COGfamily: dehydrogenases with different specificities(related to short-chain alcohol dehydrogenases); Orthologue of BL0512; PFAM_ID:adh_short.
  
 
 0.479
BAD_1147
Hypothetical protein; COG family: uncharacterized Acr; Orthologue of BL0112; PFAM_ID: DUF77.
  
     0.460
BAD_0476
Probable solute binding protein of ABC transporter system for sugars; COG family: sugar-binding periplasmicproteins_domains; Orthologue of BL1163.
  
     0.455
BAD_0197
Putative 6-phosphogluconate dehydrogenase; Catalyzes the formation of D-ribulose 5-phosphatefrom 6-phospho-D-gluconate; Orthologue of SCO3877.
       0.423
BAD_0319
Acetaldehyde dehydrogenase; Orthologue of ECs1741; Similar to ADHE_ECOLI gi|1787493 (conserved in Escherichia coli K-12); In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.410
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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