Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAD_0271Hypothetical protein; COG family: methyl-accepting chemotaxis protein; Orthologue of BL0322. (477 aa)    
Predicted Functional Partners:
pepC2
COG family: aminopeptidase C; Orthologue of BL0321; PFAM_ID:Pept_C1-like; Belongs to the peptidase C1 family.
       0.769
BAD_0553
Narrowly conserved hypothetical membrane protein; COG family: predicted integral membrane protein; Orthologue of BL1799.
  
     0.760
BAD_0660
Hypothetical protein; COG family: predicted glycosyltransferases; Orthologue of BL1007.
  
     0.753
BAD_1133
Hypothetical protein; COG family: ATPase involved in DNA repair; Orthologue of BL0121.
 
     0.753
BAD_1461
Hypothetical protein; COG family: orotate phosphoribosyltransferase; Orthologue of BL0406.
  
     0.752
BAD_1620
Hypothetical protein; Orthologue of BL0652.
  
     0.747
BAD_0775
Hypothetical protein; COG family: periplasmic sugar-binding proteins; Orthologue of BL1498.
  
     0.743
BAD_1614
Hypothetical protein; COG family: uncharacterized Bcr; Orthologue of BL0658.
 
     0.732
BAD_1622
Hypothetical protein; Orthologue of BL0650.
  
     0.728
BAD_1350
Hypothetical protein; COG family: uncharacterized Bcr; Orthologue of BL1227.
  
  
 0.727
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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