Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAD_0282COG family: ABC-type Mn_Zn transport system_periplasmic Mn_Zn-binding (lipo)protein (surface adhesina); Orthologue of BL1126; PFAM_ID: Lipoprotein_4. (313 aa)    
Predicted Functional Partners:
troB
ATP binding protein of ABC transporter; COG family: ABC-typecobalamin_Fe3+-siderophores transport systems_ ATPasecomponents; Orthologue of BL0995; PFAM_ID: ABC_tran.
 
 
 0.966
BAD_0670
COG family: ABC-type Mn2+_Zn2+ transport systems_permease components; Orthologue of BL0996; PFAM_ID: ABC-3.
 
 
 0.965
pstB
Phosphate import ATP-binding protein pstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
 0.473
rpmB
COG family: ribosomal protein L28; Orthologue of BL0330; PFAM_ID:Ribosomal_L28; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.460
rpsN
30S ribosomal protein S14-1; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.460
BAD_0626
Hypothetical protein; Identified by sequence similarity; Orthologue of Lxx14510.
 
    0.454
pstC
Probable phosphate permease protein of ABC transporter system; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
     0.443
purQ_purL
Phosphoribosylformylglycinamidine synthase; Bifunctional enzyme; Orthologue of CAC1655_BL1108.
     
 0.428
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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