Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAD_0318Transcriptional regulator; AraC family; Identified by match to protein family HMM PF00165; Orthologue of PSPPH_4841. (323 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase [NADPH] large subunit; Orthologue of Rv3859c_BL0834; ProbablegltB_ ferredoxin-dependent glutamate synthase largesubunit (EC 1.4.1.13).
    
 0.813
BAD_0317
Xylitol (sorbitol) dehydrogenase; Orthologue of mlr4915.
 
     0.807
rbtT
Hypothetical protein; Orthologue of SH0209; Ribitol transporter homolog.
 
     0.750
ydeC
Hypothetical protein; Orthologue of BSU05150; Similar to transcriptional regulator (AraC_XylSfamily).
  
     0.750
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.558
BAD_0319
Acetaldehyde dehydrogenase; Orthologue of ECs1741; Similar to ADHE_ECOLI gi|1787493 (conserved in Escherichia coli K-12); In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.459
BAD_1569
Sir2-type regulatory protein; COG family: NAD-dependent protein deacetylases_Sir2 family; Orthologue of BL1528; PFAM_ID: SIR2.
   
    0.446
BAD_0657
Hypothetical protein; COG family: transcriptional regulator; Orthologue of BL1009.
   
    0.444
BAD_0315
Probable repressor in the Rok (NagC/XylR) family; COG family: transcriptional regulators; Orthologue of BL1574; PFAM_ID:ROK.
       0.431
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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