Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BAD_0160 | BAD_0359 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Hypothetical protein; Orthologue of BL1621. | 0.762 |
BAD_0160 | BAD_0384 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Hypothetical protein; Orthologue of BL1661. | 0.506 |
BAD_0160 | BAD_0386 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | COG family: universal stress protein UspA andrelated nucleotide-binding proteins; Orthologue of BL1664; PFAM_ID: Usp. | 0.692 |
BAD_0160 | BAD_0466 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Hypothetical protein; Orthologue of BL1181. | 0.743 |
BAD_0160 | BAD_0553 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Narrowly conserved hypothetical membrane protein; COG family: predicted integral membrane protein; Orthologue of BL1799. | 0.401 |
BAD_0160 | BAD_0660 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Hypothetical protein; COG family: predicted glycosyltransferases; Orthologue of BL1007. | 0.750 |
BAD_0160 | BAD_0661 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Hypothetical protein; Orthologue of BL1006. | 0.769 |
BAD_0160 | BAD_1126 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Hypothetical protein; Orthologue of BCZK0765. | 0.760 |
BAD_0160 | BAD_1423 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Hypothetical protein; Orthologue of BL0353. | 0.707 |
BAD_0160 | BAD_1617 | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | Hypothetical protein; Orthologue of BL0655. | 0.728 |
BAD_0359 | BAD_0160 | Hypothetical protein; Orthologue of BL1621. | Possible pre-pilin peptidase; COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2. | 0.762 |
BAD_0359 | BAD_0384 | Hypothetical protein; Orthologue of BL1621. | Hypothetical protein; Orthologue of BL1661. | 0.560 |
BAD_0359 | BAD_0386 | Hypothetical protein; Orthologue of BL1621. | COG family: universal stress protein UspA andrelated nucleotide-binding proteins; Orthologue of BL1664; PFAM_ID: Usp. | 0.648 |
BAD_0359 | BAD_0466 | Hypothetical protein; Orthologue of BL1621. | Hypothetical protein; Orthologue of BL1181. | 0.744 |
BAD_0359 | BAD_0553 | Hypothetical protein; Orthologue of BL1621. | Narrowly conserved hypothetical membrane protein; COG family: predicted integral membrane protein; Orthologue of BL1799. | 0.741 |
BAD_0359 | BAD_0660 | Hypothetical protein; Orthologue of BL1621. | Hypothetical protein; COG family: predicted glycosyltransferases; Orthologue of BL1007. | 0.763 |
BAD_0359 | BAD_0661 | Hypothetical protein; Orthologue of BL1621. | Hypothetical protein; Orthologue of BL1006. | 0.772 |
BAD_0359 | BAD_1126 | Hypothetical protein; Orthologue of BL1621. | Hypothetical protein; Orthologue of BCZK0765. | 0.774 |
BAD_0359 | BAD_1423 | Hypothetical protein; Orthologue of BL1621. | Hypothetical protein; Orthologue of BL0353. | 0.766 |
BAD_0359 | BAD_1617 | Hypothetical protein; Orthologue of BL1621. | Hypothetical protein; Orthologue of BL0655. | 0.764 |
page 1 of 6