Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAD_0481Probable ABC transporter permease protein for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1159. (285 aa)    
Predicted Functional Partners:
oppD
Probable ATP-binding protein of ABC transporter system for peptides; COG family: ATPase components of variousABC-type transport systems_ contain duplicated ATPase; Orthologue of BL1158.
 0.998
BAD_0480
Similar to ABC transporter permease protein for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1160.
 
 0.997
oppF
Probable ATP binding protein of ABC transporter for peptides; COG family: ATPase components of variousABC-type transport systems_ contain duplicated ATPase; Orthologue of BL1157.
  0.997
BAD_0479
Solute binding protein of ABC transporter systemy for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL1161.
 
 0.995
BAD_1449
Probable solute binding protein of ABC transporter system; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL0394; PFAM_ID:SBP_bac_5.
 
 0.987
dppB
Probable permease protein of ABC-transporter for peptides; COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_ permeasecomponents; Orthologue of BL1387.
 0.982
dppD-2
ATP binding protein of ABC transporter; Identified by sequence similarity; Orthologue of Lxx08560_BL1348; Belongs to the ABC transporter superfamily.
 0.982
dppD
Dipeptide transport ATP-binding protein; COG family: ATPase components of various ABC-typetransport systems_ contain duplicated ATPase; Orthologue of BL1390; PFAM_ID:ABC_tran; Belongs to the ABC transporter superfamily.
 0.978
BAD_1093
Probable permease of ABC transporter for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1346; PFAM_ID:BPD_transp.
 0.978
BAD_1094
Probable solute-binding protein of ABC transporter for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL1345; PFAM_ID:SBP_bac_5.
 
 0.961
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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