Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAD_0486ABC transporter; ATP-binding protein; Identified by sequence similarity; Orthologue of Lxx18820. (221 aa)    
Predicted Functional Partners:
BAD_0485
Hypothetical protein; Orthologue of Lxx17740.
 
    0.889
BAD_0487
Hypothetical protein; Orthologue of Lxx17710.
       0.803
BAD_0604
Possible transport protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0931; PFAM_ID: DUF214.
 
 0.784
BAD_0484
Hypothetical protein; Orthologue of Lxx17750.
       0.773
BAD_0955
COG family: ABC-type cobalt transport system_ATPase component; Orthologue of BL0049; PFAM_ID: ABC_tran.
  
  
  0.763
BAD_0891
ATP binding protein of ABC transporter similar to Vex1; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0268; PFAM_ID: DUF214.
 
  0.622
BAD_1518
COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components.
 
  0.620
BAD_1519
Possible ATP binding protein of ABC transporter; COG family: ABC-type sugar (aldose) transportsystem_ ATPase component; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0197; PFAM_ID: ABC_tran.
  
     0.618
BAD_0512
Protein with weak similarity to components of ABC transporter; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL1133; PFAM_ID: DUF214.
 
  0.584
oppF
Probable ATP binding protein of ABC transporter for peptides; COG family: ATPase components of variousABC-type transport systems_ contain duplicated ATPase; Orthologue of BL1157.
 
    
0.580
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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